Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC098850.1-201ENST00000419919 790 ntBASIC13.15□□□□□ -0.3
SEC61A1P61619 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.15□□□□□ -0.3
SEC61A1P61619 RPL13P2-201ENST00000440687 659 ntBASIC13.15□□□□□ -0.3
SEC61A1P61619 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 MEIS3P1-201ENST00000495167 958 ntBASIC13.15□□□□□ -0.3
SEC61A1P61619 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.15□□□□□ -0.3
SEC61A1P61619 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC005562.1-201ENST00000583030 3219 ntBASIC13.15□□□□□ -0.3
SEC61A1P61619 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SEC61A1P61619 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
SEC61A1P61619 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
SEC61A1P61619 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SEC61A1P61619 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.15□□□□□ -0.31
SEC61A1P61619 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.14□□□□□ -0.31
SEC61A1P61619 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.14□□□□□ -0.31
SEC61A1P61619 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.14□□□□□ -0.31
SEC61A1P61619 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.14□□□□□ -0.31
SEC61A1P61619 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 RPL5P21-201ENST00000404620 815 ntBASIC13.14□□□□□ -0.31
SEC61A1P61619 COX5BP8-201ENST00000416911 349 ntBASIC13.14□□□□□ -0.31
SEC61A1P61619 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.14□□□□□ -0.31
SEC61A1P61619 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 AC123567.1-201ENST00000548294 1261 ntBASIC13.14□□□□□ -0.31
SEC61A1P61619 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SEC61A1P61619 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.14□□□□□ -0.31
SEC61A1P61619 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SEC61A1P61619 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 AL607033.1-201ENST00000623900 1599 ntBASIC13.14□□□□□ -0.31
SEC61A1P61619 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SEC61A1P61619 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SEC61A1P61619 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.14□□□□□ -0.31
SEC61A1P61619 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SEC61A1P61619 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 AC152010.1-201ENST00000415779 2006 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms