Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SRP54P61011 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP54P61011 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 AKR7A2P1-201ENST00000460134 915 ntBASIC14.72□□□□□ -0.05
SRP54P61011 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP54P61011 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP54P61011 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 AC005730.2-201ENST00000564549 1184 ntBASIC14.72□□□□□ -0.05
SRP54P61011 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP54P61011 AC020914.3-201ENST00000594712 304 ntBASIC14.72□□□□□ -0.05
SRP54P61011 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.72□□□□□ -0.05
SRP54P61011 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP54P61011 AC009093.2-202ENST00000620513 2079 ntBASIC14.72□□□□□ -0.05
SRP54P61011 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SRP54P61011 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.71□□□□□ -0.05
SRP54P61011 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SRP54P61011 AL138725.1-201ENST00000407347 1314 ntBASIC14.71□□□□□ -0.05
SRP54P61011 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 AC138028.6-201ENST00000616106 1482 ntBASIC14.71□□□□□ -0.05
SRP54P61011 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.71□□□□□ -0.05
SRP54P61011 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 RN7SKP230-201ENST00000365642 335 ntBASIC14.71□□□□□ -0.05
SRP54P61011 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP54P61011 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.71□□□□□ -0.05
SRP54P61011 CALR4P-201ENST00000431943 946 ntBASIC14.71□□□□□ -0.05
SRP54P61011 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP54P61011 AC021723.1-201ENST00000486306 515 ntBASIC14.71□□□□□ -0.05
SRP54P61011 SCARNA20.5-201ENST00000516991 142 ntBASIC14.71□□□□□ -0.05
SRP54P61011 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP54P61011 AL451050.2-201ENST00000606967 682 ntBASIC14.71□□□□□ -0.05
SRP54P61011 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP54P61011 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SRP54P61011 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SRP54P61011 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP54P61011 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
SRP54P61011 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SRP54P61011 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SRP54P61011 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SRP54P61011 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
SRP54P61011 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SRP54P61011 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
SRP54P61011 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.71□□□□□ -0.06
SRP54P61011 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.71□□□□□ -0.06
SRP54P61011 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SRP54P61011 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.7□□□□□ -0.06
SRP54P61011 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP54P61011 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP54P61011 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP54P61011 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.7□□□□□ -0.06
SRP54P61011 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP54P61011 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms