Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S2P59780 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S2P59780 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S2P59780 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S2P59780 AC092910.1-201ENST00000482027 1129 ntBASIC12.83□□□□□ -0.36
AP3S2P59780 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S2P59780 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 RN7SL832P-201ENST00000607781 1756 ntBASIC12.83□□□□□ -0.36
AP3S2P59780 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
AP3S2P59780 Z82170.1-201ENST00000625081 3192 ntBASIC12.82□□□□□ -0.36
AP3S2P59780 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
AP3S2P59780 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 HNRNPDP1-201ENST00000439535 754 ntBASIC12.82□□□□□ -0.36
AP3S2P59780 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.82□□□□□ -0.36
AP3S2P59780 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.82□□□□□ -0.36
AP3S2P59780 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 MIR6074-201ENST00000612054 107 ntBASIC12.82□□□□□ -0.36
AP3S2P59780 AC004877.2-201ENST00000623941 599 ntBASIC12.82□□□□□ -0.36
AP3S2P59780 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
AP3S2P59780 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
AP3S2P59780 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
AP3S2P59780 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.82□□□□□ -0.36
AP3S2P59780 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms