Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.01□□□□□ -0.33
FOXG1P55316 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
FOXG1P55316 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 MIR663B-201ENST00000408361 115 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 AC010141.1-201ENST00000411585 623 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 AL354877.1-201ENST00000424412 413 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 KLF2P1-201ENST00000447438 1042 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 CICP12-201ENST00000455801 843 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.01□□□□□ -0.33
FOXG1P55316 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.01□□□□□ -0.33
FOXG1P55316 ZNF767P-206ENST00000513792 565 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.01□□□□□ -0.33
FOXG1P55316 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.01□□□□□ -0.33
FOXG1P55316 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.01□□□□□ -0.33
FOXG1P55316 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 AL118558.3-201ENST00000607414 1079 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 MIR6869-201ENST00000619434 62 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.01□□□□□ -0.33
FOXG1P55316 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.01□□□□□ -0.33
FOXG1P55316 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.01□□□□□ -0.33
FOXG1P55316 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 AC097359.2-201ENST00000604992 2389 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 LINC00552-201ENST00000625151 2579 ntBASIC13.01□□□□□ -0.33
FOXG1P55316 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
FOXG1P55316 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
FOXG1P55316 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FOXG1P55316 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13□□□□□ -0.33
FOXG1P55316 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13□□□□□ -0.33
FOXG1P55316 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13□□□□□ -0.33
FOXG1P55316 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13□□□□□ -0.33
FOXG1P55316 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
FOXG1P55316 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13□□□□□ -0.33
FOXG1P55316 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13□□□□□ -0.33
FOXG1P55316 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13□□□□□ -0.33
FOXG1P55316 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
FOXG1P55316 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13□□□□□ -0.33
FOXG1P55316 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13□□□□□ -0.33
FOXG1P55316 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 PUDPP3-201ENST00000445368 636 ntBASIC13□□□□□ -0.33
FOXG1P55316 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13□□□□□ -0.33
FOXG1P55316 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13□□□□□ -0.33
FOXG1P55316 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13□□□□□ -0.33
FOXG1P55316 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13□□□□□ -0.33
FOXG1P55316 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13□□□□□ -0.33
FOXG1P55316 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
FOXG1P55316 AC009955.4-201ENST00000597192 544 ntBASIC13□□□□□ -0.33
FOXG1P55316 GPR182-203ENST00000622922 591 ntBASIC13□□□□□ -0.33
FOXG1P55316 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13□□□□□ -0.33
FOXG1P55316 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms