Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH15P55291 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH15P55291 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH15P55291 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH15P55291 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CDH15P55291 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH15P55291 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH15P55291 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CDH15P55291 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH15P55291 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH15P55291 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH15P55291 CNN2P2-201ENST00000443536 909 ntBASIC13.98□□□□□ -0.17
CDH15P55291 CNN2P3-201ENST00000450201 906 ntBASIC13.98□□□□□ -0.17
CDH15P55291 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 AL136317.3-201ENST00000618497 906 ntBASIC13.98□□□□□ -0.17
CDH15P55291 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CDH15P55291 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH15P55291 AC012508.2-201ENST00000567613 1472 ntBASIC13.98□□□□□ -0.17
CDH15P55291 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH15P55291 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH15P55291 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDH15P55291 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDH15P55291 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDH15P55291 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 PCDHB18P-202ENST00000526308 3197 ntBASIC13.97□□□□□ -0.17
CDH15P55291 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH15P55291 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 AC069335.1-201ENST00000489972 472 ntBASIC13.97□□□□□ -0.17
CDH15P55291 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH15P55291 AC243562.1-201ENST00000560672 389 ntBASIC13.97□□□□□ -0.17
CDH15P55291 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH15P55291 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 AC005498.2-205ENST00000593218 784 ntBASIC13.97□□□□□ -0.17
CDH15P55291 Z92544.3-201ENST00000624747 417 ntBASIC13.97□□□□□ -0.17
CDH15P55291 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH15P55291 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH15P55291 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH15P55291 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDH15P55291 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH15P55291 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms