Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDH12P55289 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH12P55289 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH12P55289 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 DRD5P1-201ENST00000456605 1438 ntBASIC13.94□□□□□ -0.18
CDH12P55289 FAM86LP-201ENST00000478302 853 ntBASIC13.94□□□□□ -0.18
CDH12P55289 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH12P55289 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH12P55289 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH12P55289 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH12P55289 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH12P55289 AC104794.3-201ENST00000566840 1248 ntBASIC13.94□□□□□ -0.18
CDH12P55289 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH12P55289 AC036164.1-201ENST00000570544 333 ntBASIC13.94□□□□□ -0.18
CDH12P55289 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 AC004790.1-201ENST00000612686 536 ntBASIC13.94□□□□□ -0.18
CDH12P55289 AC106028.4-201ENST00000614509 607 ntBASIC13.94□□□□□ -0.18
CDH12P55289 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH12P55289 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH12P55289 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CDH12P55289 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH12P55289 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDH12P55289 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH12P55289 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.93□□□□□ -0.18
CDH12P55289 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CDH12P55289 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH12P55289 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH12P55289 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.93□□□□□ -0.18
CDH12P55289 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH12P55289 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.93□□□□□ -0.18
CDH12P55289 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH12P55289 RARRES2P5-201ENST00000564013 466 ntBASIC13.93□□□□□ -0.18
CDH12P55289 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH12P55289 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms