Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 AC105917.1-201ENST00000506637 2539 ntBASIC10.91□□□□□ -0.66
APOC4P55056 CICP6-201ENST00000457191 2729 ntBASIC10.91□□□□□ -0.66
APOC4P55056 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.9□□□□□ -0.66
APOC4P55056 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 ZBED1P1-201ENST00000502364 1930 ntBASIC10.9□□□□□ -0.66
APOC4P55056 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
APOC4P55056 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 AL008707.1-201ENST00000422498 534 ntBASIC10.9□□□□□ -0.66
APOC4P55056 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC10.9□□□□□ -0.66
APOC4P55056 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.9□□□□□ -0.66
APOC4P55056 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.9□□□□□ -0.66
APOC4P55056 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.9□□□□□ -0.66
APOC4P55056 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.9□□□□□ -0.66
APOC4P55056 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.9□□□□□ -0.66
APOC4P55056 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 AL358472.3-201ENST00000608147 415 ntBASIC10.9□□□□□ -0.66
APOC4P55056 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 AC138649.2-201ENST00000615886 705 ntBASIC10.9□□□□□ -0.66
APOC4P55056 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.9□□□□□ -0.66
APOC4P55056 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
APOC4P55056 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.9□□□□□ -0.66
APOC4P55056 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
APOC4P55056 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.9□□□□□ -0.67
APOC4P55056 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.9□□□□□ -0.67
APOC4P55056 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
APOC4P55056 AL109954.1-202ENST00000564051 2148 ntBASIC10.9□□□□□ -0.67
APOC4P55056 AC023090.2-201ENST00000625182 2110 ntBASIC10.9□□□□□ -0.67
APOC4P55056 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.9□□□□□ -0.67
APOC4P55056 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
APOC4P55056 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
APOC4P55056 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
APOC4P55056 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 AC006058.4-201ENST00000624016 1670 ntBASIC10.89□□□□□ -0.67
APOC4P55056 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 AC138028.6-201ENST00000616106 1482 ntBASIC10.89□□□□□ -0.67
APOC4P55056 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.89□□□□□ -0.67
APOC4P55056 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
APOC4P55056 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
APOC4P55056 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.89□□□□□ -0.67
APOC4P55056 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms