Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCS2P54868 AL627422.1-201ENST00000434104 580 ntBASIC16.99■□□□□ 0.31
HMGCS2P54868 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 AC114501.1-201ENST00000445949 172 ntBASIC16.99■□□□□ 0.31
HMGCS2P54868 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 RN7SL818P-201ENST00000485099 259 ntBASIC16.99■□□□□ 0.31
HMGCS2P54868 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCS2P54868 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HMGCS2P54868 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCS2P54868 RN7SL725P-201ENST00000606439 259 ntBASIC16.99■□□□□ 0.31
HMGCS2P54868 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS2P54868 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HMGCS2P54868 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCS2P54868 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS2P54868 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HMGCS2P54868 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGCS2P54868 AC130709.1-201ENST00000484779 1212 ntBASIC16.98■□□□□ 0.31
HMGCS2P54868 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
HMGCS2P54868 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.98■□□□□ 0.31
HMGCS2P54868 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 ACE3P-201ENST00000423435 1973 ntBASIC16.98■□□□□ 0.31
HMGCS2P54868 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS2P54868 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS2P54868 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS2P54868 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HMGCS2P54868 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGCS2P54868 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS2P54868 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HMGCS2P54868 KRT8P31-201ENST00000504812 1408 ntBASIC16.97■□□□□ 0.31
HMGCS2P54868 AC009093.10-201ENST00000641956 1442 ntBASIC16.97■□□□□ 0.31
HMGCS2P54868 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HMGCS2P54868 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGCS2P54868 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
HMGCS2P54868 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HMGCS2P54868 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGCS2P54868 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HMGCS2P54868 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS2P54868 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms