Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 AC018442.1-201ENST00000421439 2061 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.25■□□□□ 0.19
CLCN3P51790 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN3P51790 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 IMP3P2-201ENST00000489760 475 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 AC006122.1-201ENST00000493323 440 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 RNA5SP423-201ENST00000517127 109 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN3P51790 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.25■□□□□ 0.19
CLCN3P51790 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN3P51790 RN7SL574P-201ENST00000581512 297 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 CYP4F23P-201ENST00000593402 1579 ntBASIC16.25■□□□□ 0.19
CLCN3P51790 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN3P51790 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN3P51790 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN3P51790 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN3P51790 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
CLCN3P51790 TMBIM7P-202ENST00000641474 1516 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 AL157791.1-201ENST00000553667 1699 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 AC144522.1-201ENST00000625111 1658 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN3P51790 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 AC006504.5-208ENST00000588784 2401 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN3P51790 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN3P51790 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN3P51790 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.24■□□□□ 0.19
CLCN3P51790 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN3P51790 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN3P51790 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN3P51790 UPF3AP2-201ENST00000457924 1132 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 AC012618.1-201ENST00000461223 412 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
CLCN3P51790 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN3P51790 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN3P51790 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN3P51790 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.24■□□□□ 0.19
CLCN3P51790 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN3P51790 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLCN3P51790 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 AL590440.2-201ENST00000641973 1595 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLCN3P51790 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLCN3P51790 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN3P51790 KRT8P28-201ENST00000433288 1390 ntBASIC16.24■□□□□ 0.19
CLCN3P51790 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms