Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSR4P51571 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.62□□□□□ -0.23
SSR4P51571 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 RNMTL1P1-201ENST00000454103 560 ntBASIC13.62□□□□□ -0.23
SSR4P51571 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.62□□□□□ -0.23
SSR4P51571 AC005740.2-201ENST00000511085 419 ntBASIC13.62□□□□□ -0.23
SSR4P51571 SCARNA20.5-201ENST00000516991 142 ntBASIC13.62□□□□□ -0.23
SSR4P51571 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.62□□□□□ -0.23
SSR4P51571 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.62□□□□□ -0.23
SSR4P51571 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.62□□□□□ -0.23
SSR4P51571 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
SSR4P51571 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSR4P51571 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.62□□□□□ -0.23
SSR4P51571 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.61□□□□□ -0.23
SSR4P51571 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 AC012441.2-201ENST00000444843 739 ntBASIC13.61□□□□□ -0.23
SSR4P51571 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 EIF4HP1-201ENST00000453115 687 ntBASIC13.61□□□□□ -0.23
SSR4P51571 CICP12-201ENST00000455801 843 ntBASIC13.61□□□□□ -0.23
SSR4P51571 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.61□□□□□ -0.23
SSR4P51571 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.61□□□□□ -0.23
SSR4P51571 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SSR4P51571 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.61□□□□□ -0.23
SSR4P51571 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SSR4P51571 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.61□□□□□ -0.23
SSR4P51571 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.61□□□□□ -0.23
SSR4P51571 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.61□□□□□ -0.23
SSR4P51571 AL451050.2-201ENST00000606967 682 ntBASIC13.61□□□□□ -0.23
SSR4P51571 AC138649.2-201ENST00000615886 705 ntBASIC13.61□□□□□ -0.23
SSR4P51571 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.61□□□□□ -0.23
SSR4P51571 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SSR4P51571 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.61□□□□□ -0.23
SSR4P51571 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 OR2I1P-210ENST00000642037 4691 ntBASIC13.61□□□□□ -0.23
SSR4P51571 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 AC138028.6-201ENST00000616106 1482 ntBASIC13.61□□□□□ -0.23
SSR4P51571 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSR4P51571 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSR4P51571 AJ011931.1-201ENST00000618749 2492 ntBASIC13.61□□□□□ -0.23
SSR4P51571 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms