Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TNNI2P48788 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
TNNI2P48788 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
TNNI2P48788 FRMPD2B-201ENST00000431305 1347 ntBASIC17.59■□□□□ 0.41
TNNI2P48788 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.59■□□□□ 0.41
TNNI2P48788 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.59■□□□□ 0.41
TNNI2P48788 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.59■□□□□ 0.41
TNNI2P48788 AC006122.1-201ENST00000493323 440 ntBASIC17.59■□□□□ 0.41
TNNI2P48788 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.59■□□□□ 0.41
TNNI2P48788 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TNNI2P48788 MIR4750-201ENST00000584564 56 ntBASIC17.59■□□□□ 0.41
TNNI2P48788 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.59■□□□□ 0.41
TNNI2P48788 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TNNI2P48788 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 AL157813.1-201ENST00000612996 587 ntBASIC17.59■□□□□ 0.41
TNNI2P48788 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.59■□□□□ 0.41
TNNI2P48788 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.59■□□□□ 0.41
TNNI2P48788 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.59■□□□□ 0.41
TNNI2P48788 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.59■□□□□ 0.41
TNNI2P48788 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNNI2P48788 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.58■□□□□ 0.41
TNNI2P48788 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNNI2P48788 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNNI2P48788 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNNI2P48788 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TNNI2P48788 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
TNNI2P48788 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TNNI2P48788 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.58■□□□□ 0.41
TNNI2P48788 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TNNI2P48788 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TNNI2P48788 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.58■□□□□ 0.4
TNNI2P48788 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.58■□□□□ 0.4
TNNI2P48788 RN7SL67P-201ENST00000492147 296 ntBASIC17.58■□□□□ 0.4
TNNI2P48788 GCOM2-201ENST00000509133 1104 ntBASIC17.58■□□□□ 0.4
TNNI2P48788 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.58■□□□□ 0.4
TNNI2P48788 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 AC026803.1-201ENST00000569130 274 ntBASIC17.58■□□□□ 0.4
TNNI2P48788 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.58■□□□□ 0.4
TNNI2P48788 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.58■□□□□ 0.4
TNNI2P48788 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.58■□□□□ 0.4
TNNI2P48788 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.58■□□□□ 0.4
TNNI2P48788 AC133540.1-201ENST00000620845 1019 ntBASIC17.58■□□□□ 0.4
TNNI2P48788 AL805961.1-201ENST00000642026 753 ntBASIC17.58■□□□□ 0.4
TNNI2P48788 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TNNI2P48788 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.58■□□□□ 0.4
TNNI2P48788 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TNNI2P48788 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TNNI2P48788 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.58■□□□□ 0.4
TNNI2P48788 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNNI2P48788 AC013268.4-201ENST00000637413 2228 ntBASIC17.57■□□□□ 0.4
TNNI2P48788 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TNNI2P48788 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 AP000845.1-201ENST00000581677 2131 ntBASIC17.57■□□□□ 0.4
TNNI2P48788 AC023090.2-201ENST00000625182 2110 ntBASIC17.57■□□□□ 0.4
TNNI2P48788 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 AC023024.2-201ENST00000623561 1993 ntBASIC17.57■□□□□ 0.4
TNNI2P48788 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TNNI2P48788 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.57■□□□□ 0.4
TNNI2P48788 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.57■□□□□ 0.4
TNNI2P48788 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.57■□□□□ 0.4
TNNI2P48788 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.57■□□□□ 0.4
TNNI2P48788 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.57■□□□□ 0.4
TNNI2P48788 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.57■□□□□ 0.4
TNNI2P48788 AL645933.1-201ENST00000440087 609 ntBASIC17.57■□□□□ 0.4
TNNI2P48788 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNNI2P48788 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.57■□□□□ 0.4
TNNI2P48788 AC131206.1-201ENST00000538078 1211 ntBASIC17.57■□□□□ 0.4
TNNI2P48788 RBM8B-201ENST00000555532 525 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms