Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 AL136309.1-201ENST00000403917 691 ntBASIC14.31□□□□□ -0.12
SLC6A12P48065 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC6A12P48065 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 KRT17P7-201ENST00000451704 1104 ntBASIC14.31□□□□□ -0.12
SLC6A12P48065 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SLC6A12P48065 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 COX5BP1-201ENST00000507622 393 ntBASIC14.31□□□□□ -0.12
SLC6A12P48065 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.31□□□□□ -0.12
SLC6A12P48065 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC6A12P48065 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 C2orf69P2-201ENST00000562032 1123 ntBASIC14.31□□□□□ -0.12
SLC6A12P48065 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC6A12P48065 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.31□□□□□ -0.12
SLC6A12P48065 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SLC6A12P48065 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC6A12P48065 AC012617.1-204ENST00000586340 2305 ntBASIC14.31□□□□□ -0.12
SLC6A12P48065 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC6A12P48065 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 LINC01230-201ENST00000625222 3017 ntBASIC14.3□□□□□ -0.12
SLC6A12P48065 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC6A12P48065 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SLC6A12P48065 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC6A12P48065 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.3□□□□□ -0.12
SLC6A12P48065 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC6A12P48065 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SLC6A12P48065 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC6A12P48065 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 KRT8P28-201ENST00000433288 1390 ntBASIC14.3□□□□□ -0.12
SLC6A12P48065 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC6A12P48065 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC6A12P48065 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC6A12P48065 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms