Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.8■□□□□ 0.28
PRPHP41219 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.8■□□□□ 0.28
PRPHP41219 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 AC103988.2-201ENST00000561804 725 ntBASIC16.8■□□□□ 0.28
PRPHP41219 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 OR10B1P-201ENST00000601666 907 ntBASIC16.8■□□□□ 0.28
PRPHP41219 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.8■□□□□ 0.28
PRPHP41219 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 AL162274.1-201ENST00000617191 1098 ntBASIC16.8■□□□□ 0.28
PRPHP41219 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 AC009093.2-202ENST00000620513 2079 ntBASIC16.8■□□□□ 0.28
PRPHP41219 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRPHP41219 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.8■□□□□ 0.28
PRPHP41219 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PRPHP41219 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRPHP41219 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PRPHP41219 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PRPHP41219 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRPHP41219 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.79■□□□□ 0.28
PRPHP41219 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 RPL7P3-201ENST00000441388 714 ntBASIC16.79■□□□□ 0.28
PRPHP41219 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.79■□□□□ 0.28
PRPHP41219 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.79■□□□□ 0.28
PRPHP41219 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.79■□□□□ 0.28
PRPHP41219 RN7SL713P-201ENST00000582127 302 ntBASIC16.79■□□□□ 0.28
PRPHP41219 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 RHOXF1P1-202ENST00000635473 501 ntBASIC16.79■□□□□ 0.28
PRPHP41219 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.79■□□□□ 0.28
PRPHP41219 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 AL590440.2-201ENST00000641973 1595 ntBASIC16.79■□□□□ 0.28
PRPHP41219 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 MYADML-201ENST00000474610 2147 ntBASIC16.79■□□□□ 0.28
PRPHP41219 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.79■□□□□ 0.28
PRPHP41219 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.79■□□□□ 0.28
PRPHP41219 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRPHP41219 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRPHP41219 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PRPHP41219 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PRPHP41219 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PRPHP41219 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 AL009178.2-201ENST00000597278 2719 ntBASIC16.78■□□□□ 0.28
PRPHP41219 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 AC139712.1-201ENST00000378256 1875 ntBASIC16.78■□□□□ 0.28
PRPHP41219 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.78■□□□□ 0.28
PRPHP41219 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.78■□□□□ 0.28
PRPHP41219 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.78■□□□□ 0.28
PRPHP41219 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PRPHP41219 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.78■□□□□ 0.28
PRPHP41219 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.78■□□□□ 0.28
PRPHP41219 PUDPP3-201ENST00000445368 636 ntBASIC16.78■□□□□ 0.28
PRPHP41219 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.78■□□□□ 0.28
PRPHP41219 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRPHP41219 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms