Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 AC012441.2-201ENST00000444843 739 ntBASIC16.39■□□□□ 0.21
RFC5P40937 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC5P40937 AC098799.1-201ENST00000504752 800 ntBASIC16.39■□□□□ 0.21
RFC5P40937 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC5P40937 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.39■□□□□ 0.21
RFC5P40937 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC5P40937 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 MIR3615-201ENST00000581999 87 ntBASIC16.39■□□□□ 0.21
RFC5P40937 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC5P40937 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 AC005324.6-201ENST00000587972 613 ntBASIC16.39■□□□□ 0.21
RFC5P40937 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.39■□□□□ 0.21
RFC5P40937 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 AC022748.3-201ENST00000621828 275 ntBASIC16.39■□□□□ 0.21
RFC5P40937 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RFC5P40937 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC5P40937 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC5P40937 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC5P40937 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC5P40937 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC5P40937 AC244394.1-201ENST00000435000 1665 ntBASIC16.38■□□□□ 0.21
RFC5P40937 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.38■□□□□ 0.21
RFC5P40937 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RFC5P40937 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RFC5P40937 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC5P40937 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.38■□□□□ 0.21
RFC5P40937 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.38■□□□□ 0.21
RFC5P40937 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.38■□□□□ 0.21
RFC5P40937 AC103810.3-201ENST00000583567 96 ntBASIC16.38■□□□□ 0.21
RFC5P40937 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.38■□□□□ 0.21
RFC5P40937 BNIP3P13-201ENST00000599968 566 ntBASIC16.38■□□□□ 0.21
RFC5P40937 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RFC5P40937 AC244452.3-201ENST00000636814 210 ntBASIC16.38■□□□□ 0.21
RFC5P40937 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC5P40937 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC5P40937 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC5P40937 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC5P40937 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC5P40937 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC5P40937 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC5P40937 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC5P40937 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC5P40937 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.37■□□□□ 0.21
RFC5P40937 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms