Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.91■□□□□ 0.62
RXRBP28702 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.91■□□□□ 0.62
RXRBP28702 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RXRBP28702 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.9■□□□□ 0.62
RXRBP28702 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.9■□□□□ 0.62
RXRBP28702 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 HNRNPA1P59-201ENST00000430583 918 ntBASIC18.9■□□□□ 0.62
RXRBP28702 CDC37P2-201ENST00000562287 1029 ntBASIC18.9■□□□□ 0.62
RXRBP28702 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.9■□□□□ 0.62
RXRBP28702 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC18.9■□□□□ 0.62
RXRBP28702 MIR5193-201ENST00000584510 109 ntBASIC18.9■□□□□ 0.62
RXRBP28702 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.9■□□□□ 0.62
RXRBP28702 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.9■□□□□ 0.62
RXRBP28702 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RXRBP28702 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RXRBP28702 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RXRBP28702 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RXRBP28702 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.89■□□□□ 0.62
RXRBP28702 AC106820.2-201ENST00000563775 3264 ntBASIC18.89■□□□□ 0.62
RXRBP28702 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.89■□□□□ 0.61
RXRBP28702 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RXRBP28702 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC18.89■□□□□ 0.61
RXRBP28702 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RXRBP28702 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RXRBP28702 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC18.89■□□□□ 0.61
RXRBP28702 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC18.89■□□□□ 0.61
RXRBP28702 RNU1-80P-201ENST00000459500 161 ntBASIC18.89■□□□□ 0.61
RXRBP28702 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RXRBP28702 KLF17P1-201ENST00000547105 1126 ntBASIC18.89■□□□□ 0.61
RXRBP28702 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC18.89■□□□□ 0.61
RXRBP28702 GRAMD4P6-201ENST00000556999 244 ntBASIC18.89■□□□□ 0.61
RXRBP28702 RN7SL556P-201ENST00000582856 298 ntBASIC18.89■□□□□ 0.61
RXRBP28702 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.89■□□□□ 0.61
RXRBP28702 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.89■□□□□ 0.61
RXRBP28702 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 LILRP1-201ENST00000444199 1370 ntBASIC18.89■□□□□ 0.61
RXRBP28702 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RXRBP28702 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
RXRBP28702 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RXRBP28702 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 AP001094.4-201ENST00000579008 2176 ntBASIC18.88■□□□□ 0.61
RXRBP28702 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RXRBP28702 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RXRBP28702 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.88■□□□□ 0.61
RXRBP28702 AC006987.1-201ENST00000413610 527 ntBASIC18.88■□□□□ 0.61
RXRBP28702 TPT1P9-201ENST00000413759 514 ntBASIC18.88■□□□□ 0.61
RXRBP28702 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC18.88■□□□□ 0.61
RXRBP28702 RPSAP12-201ENST00000435879 888 ntBASIC18.88■□□□□ 0.61
RXRBP28702 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RXRBP28702 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC18.88■□□□□ 0.61
RXRBP28702 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms