Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR600HG-201ENST00000449175 5984 ntBASIC13.74□□□□□ -0.21
ABCD3P28288 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ABCD3P28288 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 RPS2P32-201ENST00000439199 892 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 GCOM2-201ENST00000509133 1104 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.73□□□□□ -0.21
ABCD3P28288 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.73□□□□□ -0.21
ABCD3P28288 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.73□□□□□ -0.21
ABCD3P28288 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.73□□□□□ -0.21
ABCD3P28288 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.73□□□□□ -0.21
ABCD3P28288 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 MIR4683-201ENST00000579659 81 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 AC010328.2-201ENST00000597698 1111 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 MIR6752-201ENST00000618442 71 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 AC002472.3-201ENST00000640124 621 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 AC007292.2-201ENST00000593524 1812 ntBASIC13.73□□□□□ -0.21
ABCD3P28288 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ABCD3P28288 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
ABCD3P28288 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ABCD3P28288 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ABCD3P28288 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
ABCD3P28288 AL365209.1-201ENST00000624418 6473 ntBASIC13.72□□□□□ -0.21
ABCD3P28288 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ABCD3P28288 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.72□□□□□ -0.21
ABCD3P28288 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.72□□□□□ -0.21
ABCD3P28288 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.72□□□□□ -0.21
ABCD3P28288 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.72□□□□□ -0.21
ABCD3P28288 MIR4741-201ENST00000579822 90 ntBASIC13.72□□□□□ -0.21
ABCD3P28288 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.72□□□□□ -0.21
ABCD3P28288 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ABCD3P28288 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ABCD3P28288 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.72□□□□□ -0.21
ABCD3P28288 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ABCD3P28288 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ABCD3P28288 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms