Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.24■□□□□ 0.19
RFX1P22670 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 NIFKP4-201ENST00000567275 1192 ntBASIC16.24■□□□□ 0.19
RFX1P22670 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.24■□□□□ 0.19
RFX1P22670 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.24■□□□□ 0.19
RFX1P22670 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.24■□□□□ 0.19
RFX1P22670 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.24■□□□□ 0.19
RFX1P22670 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 AC055811.4-201ENST00000624039 1754 ntBASIC16.23■□□□□ 0.19
RFX1P22670 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RFX1P22670 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RFX1P22670 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFX1P22670 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 AC015802.1-201ENST00000588104 1449 ntBASIC16.23■□□□□ 0.19
RFX1P22670 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.23■□□□□ 0.19
RFX1P22670 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFX1P22670 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RFX1P22670 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RFX1P22670 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.23■□□□□ 0.19
RFX1P22670 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.23■□□□□ 0.19
RFX1P22670 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.23■□□□□ 0.19
RFX1P22670 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.23■□□□□ 0.19
RFX1P22670 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.23■□□□□ 0.19
RFX1P22670 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
RFX1P22670 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
RFX1P22670 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFX1P22670 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 AC026748.1-201ENST00000624349 3251 ntBASIC16.22■□□□□ 0.19
RFX1P22670 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RFX1P22670 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 KRT18P25-201ENST00000508931 1278 ntBASIC16.22■□□□□ 0.19
RFX1P22670 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.22■□□□□ 0.19
RFX1P22670 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.22■□□□□ 0.19
RFX1P22670 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.22■□□□□ 0.19
RFX1P22670 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 AP001063.1-201ENST00000568332 529 ntBASIC16.22■□□□□ 0.19
RFX1P22670 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RFX1P22670 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.22■□□□□ 0.19
RFX1P22670 AC005252.2-201ENST00000624630 1141 ntBASIC16.22■□□□□ 0.19
RFX1P22670 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.22■□□□□ 0.19
RFX1P22670 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFX1P22670 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.22■□□□□ 0.19
RFX1P22670 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms