Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.21□□□□□ -0.45
DEFA4P12838 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.21□□□□□ -0.45
DEFA4P12838 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.21□□□□□ -0.45
DEFA4P12838 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.21□□□□□ -0.45
DEFA4P12838 TOMM22P5-201ENST00000416399 439 ntBASIC12.21□□□□□ -0.45
DEFA4P12838 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.21□□□□□ -0.45
DEFA4P12838 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.21□□□□□ -0.45
DEFA4P12838 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 AC025181.2-201ENST00000606994 802 ntBASIC12.21□□□□□ -0.45
DEFA4P12838 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.21□□□□□ -0.45
DEFA4P12838 AL590560.3-201ENST00000623350 461 ntBASIC12.21□□□□□ -0.45
DEFA4P12838 AC004461.2-201ENST00000629517 803 ntBASIC12.21□□□□□ -0.45
DEFA4P12838 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
DEFA4P12838 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
DEFA4P12838 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
DEFA4P12838 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA4P12838 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA4P12838 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.21□□□□□ -0.46
DEFA4P12838 AC113367.3-201ENST00000508316 1912 ntBASIC12.21□□□□□ -0.46
DEFA4P12838 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
DEFA4P12838 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
DEFA4P12838 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA4P12838 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
DEFA4P12838 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA4P12838 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
DEFA4P12838 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA4P12838 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
DEFA4P12838 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DEFA4P12838 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DEFA4P12838 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
DEFA4P12838 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
DEFA4P12838 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.2□□□□□ -0.46
DEFA4P12838 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.2□□□□□ -0.46
DEFA4P12838 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
DEFA4P12838 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.2□□□□□ -0.46
DEFA4P12838 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.2□□□□□ -0.46
DEFA4P12838 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.2□□□□□ -0.46
DEFA4P12838 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.2□□□□□ -0.46
DEFA4P12838 DUX4L27-201ENST00000554796 1261 ntBASIC12.2□□□□□ -0.46
DEFA4P12838 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.2□□□□□ -0.46
DEFA4P12838 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.2□□□□□ -0.46
DEFA4P12838 AC089987.1-201ENST00000551654 2209 ntBASIC12.2□□□□□ -0.46
DEFA4P12838 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
DEFA4P12838 OR2I1P-208ENST00000641137 4948 ntBASIC12.2□□□□□ -0.46
DEFA4P12838 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
DEFA4P12838 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
DEFA4P12838 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA4P12838 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA4P12838 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms