Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
COL11A1P12107 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.49■□□□□ 0.23
COL11A1P12107 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COL11A1P12107 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 RPL13AP19-201ENST00000434320 584 ntBASIC16.49■□□□□ 0.23
COL11A1P12107 DPY19L2P5-201ENST00000456300 331 ntBASIC16.49■□□□□ 0.23
COL11A1P12107 AC018463.1-201ENST00000456674 917 ntBASIC16.49■□□□□ 0.23
COL11A1P12107 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COL11A1P12107 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.49■□□□□ 0.23
COL11A1P12107 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.49■□□□□ 0.23
COL11A1P12107 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL11A1P12107 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
COL11A1P12107 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 MYADML-201ENST00000474610 2147 ntBASIC16.49■□□□□ 0.23
COL11A1P12107 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COL11A1P12107 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.49■□□□□ 0.23
COL11A1P12107 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL11A1P12107 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COL11A1P12107 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 PYY2-201ENST00000315776 282 ntBASIC16.48■□□□□ 0.23
COL11A1P12107 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.48■□□□□ 0.23
COL11A1P12107 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 RN7SL530P-201ENST00000485097 298 ntBASIC16.48■□□□□ 0.23
COL11A1P12107 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.48■□□□□ 0.23
COL11A1P12107 AL132994.1-201ENST00000554098 400 ntBASIC16.48■□□□□ 0.23
COL11A1P12107 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.48■□□□□ 0.23
COL11A1P12107 AL132780.4-201ENST00000624870 1135 ntBASIC16.48■□□□□ 0.23
COL11A1P12107 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.48■□□□□ 0.23
COL11A1P12107 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.48■□□□□ 0.23
COL11A1P12107 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 MTHFR-210ENST00000641407 2387 ntBASIC16.48■□□□□ 0.23
COL11A1P12107 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.48■□□□□ 0.23
COL11A1P12107 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
COL11A1P12107 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL11A1P12107 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL11A1P12107 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 PPP1R2P4-201ENST00000424051 595 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 AC114501.1-201ENST00000445949 172 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.47■□□□□ 0.23
COL11A1P12107 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
COL11A1P12107 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
COL11A1P12107 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
COL11A1P12107 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.47■□□□□ 0.23
COL11A1P12107 CICP14-201ENST00000629111 2732 ntBASIC16.47■□□□□ 0.23
COL11A1P12107 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.47■□□□□ 0.23
COL11A1P12107 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL11A1P12107 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL11A1P12107 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms