Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
UBCP0CG48 MIR943-201ENST00000401286 94 ntBASIC13.14□□□□□ -0.31
UBCP0CG48 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 RARRES2P5-201ENST00000564013 466 ntBASIC13.14□□□□□ -0.31
UBCP0CG48 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 SRD5A3P1-201ENST00000603021 949 ntBASIC13.14□□□□□ -0.31
UBCP0CG48 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 AC027612.1-201ENST00000445234 2395 ntBASIC13.13□□□□□ -0.31
UBCP0CG48 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.13□□□□□ -0.31
UBCP0CG48 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
UBCP0CG48 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 TSSK5P-201ENST00000423978 907 ntBASIC13.13□□□□□ -0.31
UBCP0CG48 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.13□□□□□ -0.31
UBCP0CG48 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.13□□□□□ -0.31
UBCP0CG48 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.13□□□□□ -0.31
UBCP0CG48 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 AC135586.1-201ENST00000539323 574 ntBASIC13.13□□□□□ -0.31
UBCP0CG48 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.13□□□□□ -0.31
UBCP0CG48 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.13□□□□□ -0.31
UBCP0CG48 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.13□□□□□ -0.31
UBCP0CG48 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.13□□□□□ -0.31
UBCP0CG48 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBCP0CG48 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.12□□□□□ -0.31
UBCP0CG48 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBCP0CG48 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBCP0CG48 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBCP0CG48 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBCP0CG48 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBCP0CG48 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBCP0CG48 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms