Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 AP005264.5-201ENST00000590066 467 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 PLS3-210ENST00000626746 216 ntTSL 4 BASIC19.01■□□□□ 0.63
COL5A2P05997 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC19.01■□□□□ 0.63
COL5A2P05997 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL5A2P05997 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
COL5A2P05997 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL5A2P05997 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.01■□□□□ 0.63
COL5A2P05997 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19■□□□□ 0.63
COL5A2P05997 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19■□□□□ 0.63
COL5A2P05997 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19■□□□□ 0.63
COL5A2P05997 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19■□□□□ 0.63
COL5A2P05997 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COL5A2P05997 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC19■□□□□ 0.63
COL5A2P05997 CHCHD2P2-201ENST00000503744 321 ntBASIC19■□□□□ 0.63
COL5A2P05997 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC19■□□□□ 0.63
COL5A2P05997 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC19■□□□□ 0.63
COL5A2P05997 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC19■□□□□ 0.63
COL5A2P05997 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC19■□□□□ 0.63
COL5A2P05997 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL5A2P05997 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19■□□□□ 0.63
COL5A2P05997 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
COL5A2P05997 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL5A2P05997 KRT8P18-201ENST00000413425 1445 ntBASIC19■□□□□ 0.63
COL5A2P05997 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.99■□□□□ 0.63
COL5A2P05997 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 OR52M2P-201ENST00000414298 959 ntBASIC18.99■□□□□ 0.63
COL5A2P05997 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.99■□□□□ 0.63
COL5A2P05997 HLA-DPA2-205ENST00000433582 733 ntBASIC18.99■□□□□ 0.63
COL5A2P05997 AL161932.2-201ENST00000435436 679 ntBASIC18.99■□□□□ 0.63
COL5A2P05997 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.99■□□□□ 0.63
COL5A2P05997 GRPEL2P1-201ENST00000453145 339 ntBASIC18.99■□□□□ 0.63
COL5A2P05997 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.99■□□□□ 0.63
COL5A2P05997 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.99■□□□□ 0.63
COL5A2P05997 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL5A2P05997 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
COL5A2P05997 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COL5A2P05997 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COL5A2P05997 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.99■□□□□ 0.63
COL5A2P05997 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COL5A2P05997 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.99■□□□□ 0.63
COL5A2P05997 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COL5A2P05997 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 RPL3P2-204ENST00000413027 1203 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 BX679664.3-201ENST00000414070 555 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 OR51A9P-201ENST00000422578 911 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.98■□□□□ 0.63
COL5A2P05997 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.98■□□□□ 0.63
COL5A2P05997 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL5A2P05997 AC113935.1-201ENST00000471722 555 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 AC008026.2-201ENST00000495438 348 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms