Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HMGN1P05114 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 AC016397.2-201ENST00000624848 1985 ntBASIC13.56□□□□□ -0.24
HMGN1P05114 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.56□□□□□ -0.24
HMGN1P05114 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HMGN1P05114 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 BTBD7P1-201ENST00000447253 1453 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 TCAM1P-207ENST00000485295 1537 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.55□□□□□ -0.24
HMGN1P05114 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 BX842568.4-201ENST00000421222 227 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.55□□□□□ -0.24
HMGN1P05114 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.55□□□□□ -0.24
HMGN1P05114 AC125807.1-201ENST00000483097 614 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 AC026410.3-201ENST00000514280 936 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.55□□□□□ -0.24
HMGN1P05114 SNHG9-202ENST00000564014 471 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 AL844908.2-201ENST00000609461 460 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 KRT8P14-201ENST00000414254 1442 ntBASIC13.55□□□□□ -0.24
HMGN1P05114 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGN1P05114 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HMGN1P05114 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HMGN1P05114 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMGN1P05114 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGN1P05114 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 KLF2P3-201ENST00000451977 1087 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGN1P05114 AC025678.2-201ENST00000562061 970 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 AC140878.1-201ENST00000565277 250 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.54□□□□□ -0.24
HMGN1P05114 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGN1P05114 AC093813.1-201ENST00000605066 256 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 AC107373.2-201ENST00000607735 490 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
HMGN1P05114 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 Z92544.3-201ENST00000624747 417 ntBASIC13.54□□□□□ -0.24
HMGN1P05114 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HMGN1P05114 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGN1P05114 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms