Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.13□□□□□ -0.15
MT-ND1P03886 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 KRT18P43-201ENST00000469825 1281 ntBASIC14.13□□□□□ -0.15
MT-ND1P03886 HLA-V-204ENST00000476601 1289 ntBASIC14.13□□□□□ -0.15
MT-ND1P03886 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
MT-ND1P03886 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.13□□□□□ -0.15
MT-ND1P03886 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.13□□□□□ -0.15
MT-ND1P03886 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.12□□□□□ -0.15
MT-ND1P03886 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
MT-ND1P03886 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
MT-ND1P03886 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.12□□□□□ -0.15
MT-ND1P03886 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
MT-ND1P03886 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
MT-ND1P03886 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 RPL13P2-201ENST00000440687 659 ntBASIC14.12□□□□□ -0.15
MT-ND1P03886 AC004967.1-201ENST00000453589 447 ntBASIC14.12□□□□□ -0.15
MT-ND1P03886 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 MIR497HG-202ENST00000572453 3838 ntBASIC14.12□□□□□ -0.15
MT-ND1P03886 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.12□□□□□ -0.15
MT-ND1P03886 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.12□□□□□ -0.15
MT-ND1P03886 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.12□□□□□ -0.15
MT-ND1P03886 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.12□□□□□ -0.15
MT-ND1P03886 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
MT-ND1P03886 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 FAM90A12P-201ENST00000519497 2375 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 FAM90A24P-201ENST00000520792 2369 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
MT-ND1P03886 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MT-ND1P03886 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MT-ND1P03886 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.11□□□□□ -0.15
MT-ND1P03886 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.11□□□□□ -0.15
MT-ND1P03886 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.11□□□□□ -0.15
MT-ND1P03886 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.11□□□□□ -0.15
MT-ND1P03886 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms