Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.14■□□□□ 0.65
LTN1O94822 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 AC010234.1-201ENST00000494599 870 ntBASIC19.14■□□□□ 0.65
LTN1O94822 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC19.14■□□□□ 0.65
LTN1O94822 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.14■□□□□ 0.65
LTN1O94822 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.14■□□□□ 0.65
LTN1O94822 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC19.14■□□□□ 0.65
LTN1O94822 AC011247.3-201ENST00000603297 438 ntBASIC19.14■□□□□ 0.65
LTN1O94822 AC104506.1-201ENST00000609247 429 ntBASIC19.14■□□□□ 0.65
LTN1O94822 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.14■□□□□ 0.65
LTN1O94822 AC138466.4-201ENST00000623965 852 ntBASIC19.14■□□□□ 0.65
LTN1O94822 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
LTN1O94822 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
LTN1O94822 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTN1O94822 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LTN1O94822 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LTN1O94822 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC19.13■□□□□ 0.65
LTN1O94822 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.13■□□□□ 0.65
LTN1O94822 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.13■□□□□ 0.65
LTN1O94822 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LTN1O94822 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
LTN1O94822 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.13■□□□□ 0.65
LTN1O94822 AC084752.1-201ENST00000509766 622 ntBASIC19.13■□□□□ 0.65
LTN1O94822 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.13■□□□□ 0.65
LTN1O94822 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
LTN1O94822 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.13■□□□□ 0.65
LTN1O94822 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.13■□□□□ 0.65
LTN1O94822 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTN1O94822 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.12■□□□□ 0.65
LTN1O94822 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LTN1O94822 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LTN1O94822 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.12■□□□□ 0.65
LTN1O94822 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.12■□□□□ 0.65
LTN1O94822 AC093909.3-201ENST00000504783 336 ntBASIC19.12■□□□□ 0.65
LTN1O94822 AP003398.1-201ENST00000531124 318 ntBASIC19.12■□□□□ 0.65
LTN1O94822 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 AC007250.1-201ENST00000608934 338 ntBASIC19.12■□□□□ 0.65
LTN1O94822 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LTN1O94822 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
LTN1O94822 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LTN1O94822 AC023157.3-201ENST00000619086 2088 ntBASIC19.12■□□□□ 0.65
LTN1O94822 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LTN1O94822 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LTN1O94822 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.12■□□□□ 0.65
LTN1O94822 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTN1O94822 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LTN1O94822 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LTN1O94822 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 AC018638.5-201ENST00000450885 754 ntBASIC19.11■□□□□ 0.65
LTN1O94822 RN7SL788P-201ENST00000460504 316 ntBASIC19.11■□□□□ 0.65
LTN1O94822 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.11■□□□□ 0.65
LTN1O94822 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.11■□□□□ 0.65
LTN1O94822 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.11■□□□□ 0.65
LTN1O94822 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.11■□□□□ 0.65
LTN1O94822 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
LTN1O94822 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LTN1O94822 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.11■□□□□ 0.65
LTN1O94822 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LTN1O94822 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.11■□□□□ 0.65
LTN1O94822 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms