Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 FRMD6-AS1-201ENST00000617151 2229 ntBASIC6.42□□□□□ -1.38
USH2AO75445 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
USH2AO75445 HNRNPA1P21-201ENST00000424115 961 ntBASIC6.42□□□□□ -1.38
USH2AO75445 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 AC008021.1-201ENST00000474180 414 ntBASIC6.42□□□□□ -1.38
USH2AO75445 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 AC010335.3-201ENST00000623767 531 ntBASIC6.42□□□□□ -1.38
USH2AO75445 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 AC069061.4-201ENST00000581294 1347 ntBASIC6.42□□□□□ -1.38
USH2AO75445 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 KRT8P28-201ENST00000433288 1390 ntBASIC6.42□□□□□ -1.38
USH2AO75445 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 RPL13AP3-202ENST00000494676 1473 ntBASIC6.42□□□□□ -1.38
USH2AO75445 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 API5-203ENST00000455725 2257 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 ILF3-AS1-201ENST00000591501 1983 ntBASIC6.42□□□□□ -1.38
USH2AO75445 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 GH1-203ENST00000351388 685 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USH2AO75445 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC6.42□□□□□ -1.38
USH2AO75445 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 NRADDP-201ENST00000437305 691 ntBASIC6.42□□□□□ -1.38
USH2AO75445 NALT1-202ENST00000450304 437 ntTSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 PRSS3P1-201ENST00000503996 742 ntBASIC6.42□□□□□ -1.38
USH2AO75445 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 MIR6749-201ENST00000617008 69 ntBASIC6.42□□□□□ -1.38
USH2AO75445 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC6.42□□□□□ -1.38
USH2AO75445 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USH2AO75445 AP000533.1-201ENST00000456143 1177 ntBASIC6.42□□□□□ -1.38
USH2AO75445 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 HNRNPA1P7-201ENST00000521273 963 ntBASIC6.42□□□□□ -1.38
USH2AO75445 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 AC022001.3-201ENST00000606330 596 ntBASIC6.42□□□□□ -1.38
USH2AO75445 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 LINC01101-201ENST00000622953 1884 ntBASIC6.41□□□□□ -1.38
USH2AO75445 AL591122.2-201ENST00000624125 1853 ntBASIC6.41□□□□□ -1.38
USH2AO75445 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
USH2AO75445 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 PAUPAR-201ENST00000630360 2965 ntBASIC6.41□□□□□ -1.38
USH2AO75445 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
USH2AO75445 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USH2AO75445 AC092573.1-201ENST00000433054 884 ntBASIC6.41□□□□□ -1.38
USH2AO75445 YY1P2-201ENST00000438766 948 ntBASIC6.41□□□□□ -1.38
USH2AO75445 RN7SL33P-201ENST00000462543 342 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms