Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ALG1L5P-201ENST00000482043 771 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.7□□□□□ -0.54
ZNF253O75346 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 AC025048.3-201ENST00000590609 569 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
ZNF253O75346 AC005702.4-201ENST00000618393 416 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 AC009093.7-201ENST00000623853 1223 ntBASIC11.7□□□□□ -0.54
ZNF253O75346 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ZNF253O75346 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.7□□□□□ -0.54
ZNF253O75346 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ZNF253O75346 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 NUTM2HP-201ENST00000442076 2498 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
ZNF253O75346 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 AC004461.1-201ENST00000412461 403 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 AL080243.2-201ENST00000418783 582 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 RPL13P2-201ENST00000440687 659 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.69□□□□□ -0.54
ZNF253O75346 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.69□□□□□ -0.54
ZNF253O75346 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.69□□□□□ -0.54
ZNF253O75346 AC026150.2-201ENST00000564693 1156 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.69□□□□□ -0.54
ZNF253O75346 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.69□□□□□ -0.54
ZNF253O75346 AC004835.2-201ENST00000603762 682 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 AL033527.5-202ENST00000641632 1098 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.69□□□□□ -0.54
ZNF253O75346 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.69□□□□□ -0.54
ZNF253O75346 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 MTHFR-210ENST00000641407 2387 ntBASIC11.69□□□□□ -0.54
ZNF253O75346 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
ZNF253O75346 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ZNF253O75346 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.69□□□□□ -0.54
ZNF253O75346 PCDHA5-203ENST00000614258 4248 ntBASIC11.68□□□□□ -0.54
ZNF253O75346 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.68□□□□□ -0.54
ZNF253O75346 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ZNF253O75346 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ZNF253O75346 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ZNF253O75346 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ZNF253O75346 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ZNF253O75346 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.68□□□□□ -0.54
ZNF253O75346 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms