Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH16O75309 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH16O75309 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH16O75309 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
CDH16O75309 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 AC092364.2-202ENST00000597012 1073 ntBASIC15.1■□□□□ 0.01
CDH16O75309 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 MIR6074-201ENST00000612054 107 ntBASIC15.1■□□□□ 0.01
CDH16O75309 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CDH16O75309 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDH16O75309 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDH16O75309 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH16O75309 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH16O75309 AC073548.1-201ENST00000624088 1882 ntBASIC15.1■□□□□ 0.01
CDH16O75309 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH16O75309 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH16O75309 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH16O75309 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH16O75309 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH16O75309 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH16O75309 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH16O75309 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH16O75309 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH16O75309 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH16O75309 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH16O75309 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH16O75309 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH16O75309 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CDH16O75309 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 AC215219.1-201ENST00000400706 1817 ntBASIC15.08■□□□□ 0.01
CDH16O75309 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CDH16O75309 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH16O75309 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CDH16O75309 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.08■□□□□ 0
CDH16O75309 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH16O75309 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH16O75309 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH16O75309 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CDH16O75309 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDH16O75309 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.08■□□□□ 0
CDH16O75309 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH16O75309 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
CDH16O75309 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.08■□□□□ 0
CDH16O75309 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH16O75309 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH16O75309 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH16O75309 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.08■□□□□ 0
CDH16O75309 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH16O75309 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.08■□□□□ 0
CDH16O75309 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.08■□□□□ 0
CDH16O75309 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.08■□□□□ 0
CDH16O75309 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms