Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CPNE3O75131 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
CPNE3O75131 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.39□□□□□ -0.11
CPNE3O75131 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.39□□□□□ -0.11
CPNE3O75131 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE3O75131 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE3O75131 AL118558.3-201ENST00000607414 1079 ntBASIC14.39□□□□□ -0.11
CPNE3O75131 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CPNE3O75131 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE3O75131 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE3O75131 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
CPNE3O75131 AC020658.6-201ENST00000623564 1870 ntBASIC14.39□□□□□ -0.11
CPNE3O75131 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE3O75131 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 AC009090.5-201ENST00000624886 2285 ntBASIC14.39□□□□□ -0.11
CPNE3O75131 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE3O75131 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 AC105250.1-201ENST00000509378 2057 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 AC055811.4-201ENST00000624039 1754 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CPNE3O75131 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 MIR1247-201ENST00000408206 136 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 AC079178.1-201ENST00000420915 656 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 COX5BP1-201ENST00000507622 393 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CPNE3O75131 C2orf69P2-201ENST00000562032 1123 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.38□□□□□ -0.11
CPNE3O75131 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 AC005695.3-201ENST00000614522 232 ntBASIC14.38□□□□□ -0.11
CPNE3O75131 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE3O75131 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CPNE3O75131 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CPNE3O75131 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE3O75131 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CPNE3O75131 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms