Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A2O43868 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A2O43868 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 AL049840.4-201ENST00000602422 811 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 LINC01115-203ENST00000606068 577 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 AC005695.3-201ENST00000614522 232 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 INTS4P2-202ENST00000614726 2019 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 AC007292.2-201ENST00000593524 1812 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SLC28A2O43868 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SLC28A2O43868 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
SLC28A2O43868 AL591846.1-201ENST00000451736 433 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 RPL13AP25-201ENST00000484130 612 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 IMP3P2-201ENST00000489760 475 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.44□□□□□ -0.1
SLC28A2O43868 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC28A2O43868 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 AC245884.6-201ENST00000515672 1067 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 AP006547.1-201ENST00000563435 692 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC28A2O43868 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 AL353726.2-201ENST00000623259 884 ntBASIC14.44□□□□□ -0.1
SLC28A2O43868 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SLC28A2O43868 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A2O43868 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A2O43868 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A2O43868 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 AHCYP2-201ENST00000430630 1300 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms