Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC140479.7-201ENST00000636301 2332 ntBASIC12.98□□□□□ -0.33
PHF1O43189 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PHF1O43189 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PHF1O43189 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.98□□□□□ -0.33
PHF1O43189 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.98□□□□□ -0.33
PHF1O43189 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 KRT18P43-201ENST00000469825 1281 ntBASIC12.98□□□□□ -0.33
PHF1O43189 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.98□□□□□ -0.33
PHF1O43189 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.98□□□□□ -0.33
PHF1O43189 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.98□□□□□ -0.33
PHF1O43189 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.98□□□□□ -0.33
PHF1O43189 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.98□□□□□ -0.33
PHF1O43189 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
PHF1O43189 AC104581.4-201ENST00000623126 3052 ntBASIC12.98□□□□□ -0.33
PHF1O43189 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
PHF1O43189 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PHF1O43189 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.97□□□□□ -0.33
PHF1O43189 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
PHF1O43189 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.97□□□□□ -0.33
PHF1O43189 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.97□□□□□ -0.33
PHF1O43189 AC010328.2-201ENST00000597698 1111 ntBASIC12.97□□□□□ -0.33
PHF1O43189 AL049840.4-201ENST00000602422 811 ntBASIC12.97□□□□□ -0.33
PHF1O43189 AC133539.2-201ENST00000604757 467 ntBASIC12.97□□□□□ -0.33
PHF1O43189 AC106872.11-201ENST00000605838 421 ntBASIC12.97□□□□□ -0.33
PHF1O43189 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PHF1O43189 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.97□□□□□ -0.33
PHF1O43189 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PHF1O43189 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 CICP14-201ENST00000629111 2732 ntBASIC12.97□□□□□ -0.33
PHF1O43189 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PHF1O43189 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms