Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHL1O00533 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.9■□□□□ 0.62
CHL1O00533 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHL1O00533 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.9■□□□□ 0.62
CHL1O00533 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 OR2R1P-201ENST00000441404 914 ntBASIC18.9■□□□□ 0.62
CHL1O00533 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.9■□□□□ 0.62
CHL1O00533 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHL1O00533 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.9■□□□□ 0.62
CHL1O00533 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.9■□□□□ 0.62
CHL1O00533 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.9■□□□□ 0.62
CHL1O00533 MIR6074-201ENST00000612054 107 ntBASIC18.9■□□□□ 0.62
CHL1O00533 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.9■□□□□ 0.62
CHL1O00533 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.9■□□□□ 0.62
CHL1O00533 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.9■□□□□ 0.62
CHL1O00533 AC018629.1-201ENST00000623381 1736 ntBASIC18.9■□□□□ 0.62
CHL1O00533 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CHL1O00533 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.9■□□□□ 0.62
CHL1O00533 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHL1O00533 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHL1O00533 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHL1O00533 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHL1O00533 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
CHL1O00533 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHL1O00533 AC106881.1-201ENST00000605849 3329 ntBASIC18.89■□□□□ 0.62
CHL1O00533 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.89■□□□□ 0.61
CHL1O00533 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHL1O00533 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.89■□□□□ 0.61
CHL1O00533 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.89■□□□□ 0.61
CHL1O00533 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.89■□□□□ 0.61
CHL1O00533 CHMP4BP1-201ENST00000556017 588 ntBASIC18.89■□□□□ 0.61
CHL1O00533 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.89■□□□□ 0.61
CHL1O00533 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.89■□□□□ 0.61
CHL1O00533 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.89■□□□□ 0.61
CHL1O00533 AC092299.1-201ENST00000632679 757 ntBASIC18.89■□□□□ 0.61
CHL1O00533 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.89■□□□□ 0.61
CHL1O00533 AC008132.1-202ENST00000342005 1389 ntBASIC18.89■□□□□ 0.61
CHL1O00533 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHL1O00533 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.89■□□□□ 0.61
CHL1O00533 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.89■□□□□ 0.61
CHL1O00533 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHL1O00533 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CHL1O00533 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.88■□□□□ 0.61
CHL1O00533 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.88■□□□□ 0.61
CHL1O00533 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.88■□□□□ 0.61
CHL1O00533 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.88■□□□□ 0.61
CHL1O00533 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHL1O00533 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.88■□□□□ 0.61
CHL1O00533 AL596276.2-201ENST00000447525 331 ntBASIC18.88■□□□□ 0.61
CHL1O00533 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.88■□□□□ 0.61
CHL1O00533 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.88■□□□□ 0.61
CHL1O00533 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CHL1O00533 PGAM1P5-201ENST00000548011 764 ntBASIC18.88■□□□□ 0.61
CHL1O00533 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CHL1O00533 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.88■□□□□ 0.61
CHL1O00533 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.88■□□□□ 0.61
CHL1O00533 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.88■□□□□ 0.61
CHL1O00533 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.88■□□□□ 0.61
CHL1O00533 AC138627.1-207ENST00000641560 1006 ntBASIC18.88■□□□□ 0.61
CHL1O00533 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 AL157791.1-201ENST00000553667 1699 ntBASIC18.88■□□□□ 0.61
CHL1O00533 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHL1O00533 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms