Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.5■□□□□ 0.07
SRRM3A6NNA2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 PHKG1P2-201ENST00000457537 863 ntBASIC15.5■□□□□ 0.07
SRRM3A6NNA2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 BANF1P1-201ENST00000553684 263 ntBASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 U62317.3-201ENST00000608319 855 ntBASIC15.5■□□□□ 0.07
SRRM3A6NNA2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRRM3A6NNA2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AL161772.1-201ENST00000610494 4412 ntBASIC15.49■□□□□ 0.07
SRRM3A6NNA2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 C2orf69P2-201ENST00000562032 1123 ntBASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC097359.3-201ENST00000603982 1210 ntBASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC015967.2-201ENST00000624092 234 ntBASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC006435.4-201ENST00000625037 234 ntBASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AL356737.1-201ENST00000634391 234 ntBASIC15.49■□□□□ 0.07
SRRM3A6NNA2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.49■□□□□ 0.07
SRRM3A6NNA2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.48■□□□□ 0.07
SRRM3A6NNA2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SRRM3A6NNA2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SRRM3A6NNA2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SRRM3A6NNA2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SRRM3A6NNA2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms