Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AC118758.2-201ENST00000614242 2813 ntBASIC12.98□□□□□ -0.33
SHISA3A0PJX4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AC004461.1-201ENST00000412461 403 ntBASIC12.98□□□□□ -0.33
SHISA3A0PJX4 STK33P1-201ENST00000423835 1218 ntBASIC12.98□□□□□ -0.33
SHISA3A0PJX4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 MIR6074-201ENST00000612054 107 ntBASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AP002761.4-201ENST00000565433 3361 ntBASIC12.97□□□□□ -0.33
SHISA3A0PJX4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AC051619.7-201ENST00000568314 623 ntBASIC12.97□□□□□ -0.33
SHISA3A0PJX4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 MIR6080-201ENST00000617359 66 ntBASIC12.97□□□□□ -0.33
SHISA3A0PJX4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms