Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 AL356585.2-201ENST00000625078 2396 ntBASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 AL359881.3-201ENST00000602640 1721 ntBASIC14.58□□□□□ -0.07
RNF11Q9Y3C5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC087499.6-201ENST00000411576 835 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 KLF2P2-201ENST00000416807 1039 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC114812.1-204ENST00000449669 728 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 ELK1P1-201ENST00000485699 580 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC026434.2-201ENST00000506094 1078 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC022616.1-201ENST00000518688 554 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 API5-211ENST00000534695 560 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 RN7SL204P-201ENST00000582831 262 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC133539.2-201ENST00000604757 467 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC005252.2-201ENST00000624630 1141 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AL365209.1-201ENST00000624418 6473 ntBASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RNF11Q9Y3C5 AC011474.4-201ENST00000623523 2076 ntBASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 AC055811.4-201ENST00000624039 1754 ntBASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 AL354702.1-201ENST00000442006 1960 ntBASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.57□□□□□ -0.08
RNF11Q9Y3C5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms