Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC005252.3-201ENST00000623855 2258 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 SALL4P5-201ENST00000419001 1760 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC105206.1-202ENST00000314927 2368 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 RNU1-114P-201ENST00000365297 166 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC004890.2-204ENST00000481968 304 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 DUX4L27-201ENST00000554796 1261 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 SPDYE22P-201ENST00000582158 798 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC067750.1-201ENST00000608826 6545 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 AC003102.2-201ENST00000589195 1469 ntBASIC14.11□□□□□ -0.15
VAPAQ9P0L0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAPAQ9P0L0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 TCAM1P-207ENST00000485295 1537 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC022144.1-201ENST00000602255 1580 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 RPL13AP25-201ENST00000484130 612 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC022616.1-201ENST00000518688 554 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AL390754.1-201ENST00000619088 582 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC007431.3-201ENST00000623221 587 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 AC011840.2-201ENST00000563063 1520 ntBASIC14.1□□□□□ -0.15
VAPAQ9P0L0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms