Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC52A1Q9NWF4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
SLC52A1Q9NWF4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AGGF1P1-201ENST00000509500 2073 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 LAP3P2-201ENST00000454686 1454 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AC025183.3-201ENST00000623526 1482 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 PPP1R2P4-201ENST00000424051 595 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AC093826.1-201ENST00000508655 993 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 DNM1P51-201ENST00000558149 522 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 AC011471.3-201ENST00000623576 402 ntBASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC52A1Q9NWF4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 AC015688.4-201ENST00000580780 1647 ntBASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 HCG27-204ENST00000424675 895 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 AGPAT5P1-201ENST00000455855 1019 ntBASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 AC226150.1-201ENST00000544259 466 ntBASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC52A1Q9NWF4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC52A1Q9NWF4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms