Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 KRT8P28-201ENST00000433288 1390 ntBASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 RN7SL832P-201ENST00000607781 1756 ntBASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 AC010141.1-201ENST00000411585 623 ntBASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 CICP12-201ENST00000455801 843 ntBASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 MIR4783-201ENST00000580343 82 ntBASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.48■□□□□ 0.23
BLOC1S4Q9NUP1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AC011498.7-201ENST00000624986 2027 ntBASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AC117489.1-201ENST00000625169 3217 ntBASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 CSF2RBP1-201ENST00000447905 391 ntBASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AC079316.1-201ENST00000548397 411 ntBASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.47■□□□□ 0.23
BLOC1S4Q9NUP1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms