Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PSAT1P2-201ENST00000426107 972 ntBASIC13.46□□□□□ -0.26
CHD8Q9HCK8 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 RN7SL128P-201ENST00000467883 305 ntBASIC13.46□□□□□ -0.26
CHD8Q9HCK8 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.46□□□□□ -0.26
CHD8Q9HCK8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.46□□□□□ -0.26
CHD8Q9HCK8 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 AC117503.4-201ENST00000623229 1418 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 BCL2-203ENST00000589955 5011 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 RNU1-80P-201ENST00000459500 161 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 AC132812.1-201ENST00000583145 892 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 MED25-209ENST00000612791 881 ntTSL 5 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 CA5BP1-205ENST00000435806 1064 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 RPSAP12-201ENST00000435879 888 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 AC139100.2-201ENST00000616901 662 ntBASIC13.45□□□□□ -0.26
CHD8Q9HCK8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.45□□□□□ -0.26
CHD8Q9HCK8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 MIR339-201ENST00000362153 94 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AL137244.1-201ENST00000422931 865 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 GCOM2-201ENST00000509133 1104 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 AL132994.1-201ENST00000554098 400 ntBASIC13.44□□□□□ -0.26
CHD8Q9HCK8 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHD8Q9HCK8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms