Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.12□□□□□ -0.31
ELL3Q9HB65 AC004840.1-201ENST00000636359 365 ntBASIC13.12□□□□□ -0.31
ELL3Q9HB65 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.12□□□□□ -0.31
ELL3Q9HB65 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ELL3Q9HB65 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ELL3Q9HB65 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC007787.1-201ENST00000588095 1583 ntBASIC13.11□□□□□ -0.31
ELL3Q9HB65 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC135586.1-201ENST00000539323 574 ntBASIC13.11□□□□□ -0.31
ELL3Q9HB65 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC004461.2-201ENST00000629517 803 ntBASIC13.11□□□□□ -0.31
ELL3Q9HB65 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ELL3Q9HB65 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ELL3Q9HB65 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 AC138969.3-201ENST00000546612 1459 ntBASIC13.1□□□□□ -0.31
ELL3Q9HB65 AC138932.2-201ENST00000548268 1459 ntBASIC13.1□□□□□ -0.31
ELL3Q9HB65 AC126755.4-201ENST00000549796 1459 ntBASIC13.1□□□□□ -0.31
ELL3Q9HB65 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.1□□□□□ -0.31
ELL3Q9HB65 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ELL3Q9HB65 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms