Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 KRT18P28-201ENST00000453838 1332 ntBASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.17■□□□□ 0.02
PHACTR1Q9C0D0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 SALL4P5-201ENST00000419001 1760 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 METTL21AP1-201ENST00000438852 635 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 FAM86GP-201ENST00000448322 971 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC114812.1-204ENST00000449669 728 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 SPDYE18-201ENST00000510091 1050 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC093028.1-201ENST00000622998 982 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 MRPL37P1-201ENST00000592451 1337 ntBASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHACTR1Q9C0D0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 MEP1AP4-201ENST00000423244 1087 ntBASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHACTR1Q9C0D0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms