Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 AC008494.3-201ENST00000606615 944 ntBASIC13.78□□□□□ -0.2
TRIM2Q9C040 AP005019.2-201ENST00000615104 511 ntBASIC13.78□□□□□ -0.2
TRIM2Q9C040 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRIM2Q9C040 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRIM2Q9C040 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRIM2Q9C040 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRIM2Q9C040 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRIM2Q9C040 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TRIM2Q9C040 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 ACKR1-201ENST00000368121 1240 ntBASIC13.77□□□□□ -0.21
TRIM2Q9C040 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 LRRC59-203ENST00000576448 1531 ntBASIC13.77□□□□□ -0.21
TRIM2Q9C040 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRIM2Q9C040 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM2Q9C040 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 AC055811.4-201ENST00000624039 1754 ntBASIC13.76□□□□□ -0.21
TRIM2Q9C040 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 AC015802.1-201ENST00000588104 1449 ntBASIC13.76□□□□□ -0.21
TRIM2Q9C040 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM2Q9C040 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRIM2Q9C040 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms