Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM54Q9BYV2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 AC005252.2-201ENST00000624630 1141 ntBASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 AC104581.4-201ENST00000623126 3052 ntBASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM54Q9BYV2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC006504.5-208ENST00000588784 2401 ntBASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC113367.3-201ENST00000508316 1912 ntBASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 MTHFR-210ENST00000641407 2387 ntBASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC055811.4-201ENST00000624039 1754 ntBASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 ACTBP8-201ENST00000403258 1108 ntBASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM54Q9BYV2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms