Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.68□□□□□ -0.38
COL12A1Q99715 AC025594.1-201ENST00000469533 543 ntBASIC12.68□□□□□ -0.38
COL12A1Q99715 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
COL12A1Q99715 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
COL12A1Q99715 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.68□□□□□ -0.38
COL12A1Q99715 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC12.68□□□□□ -0.38
COL12A1Q99715 OR3A1-202ENST00000615105 966 ntBASIC12.68□□□□□ -0.38
COL12A1Q99715 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 AP002353.1-201ENST00000528257 1599 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
COL12A1Q99715 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 AC136604.1-202ENST00000425471 771 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 HMGA1P2-201ENST00000430198 324 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC12.67□□□□□ -0.38
COL12A1Q99715 MIR2278-201ENST00000516344 96 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 AC022001.3-201ENST00000606330 596 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 FKBP4P8-201ENST00000610931 1369 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 KRT18P44-201ENST00000416086 1285 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 ALG1L15P-201ENST00000482834 794 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 RN7SL147P-201ENST00000487345 298 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 AC092910.2-201ENST00000491262 348 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 ABCC6P2-201ENST00000526069 590 ntBASIC12.67□□□□□ -0.38
COL12A1Q99715 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.67□□□□□ -0.38
COL12A1Q99715 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL12A1Q99715 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.67□□□□□ -0.38
COL12A1Q99715 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
COL12A1Q99715 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.66□□□□□ -0.38
COL12A1Q99715 ISL1-203ENST00000511384 981 ntTSL 5 BASIC12.66□□□□□ -0.38
COL12A1Q99715 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.66□□□□□ -0.38
COL12A1Q99715 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.66□□□□□ -0.38
COL12A1Q99715 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 AC007250.1-201ENST00000608934 338 ntBASIC12.66□□□□□ -0.38
COL12A1Q99715 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.66□□□□□ -0.38
COL12A1Q99715 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.66□□□□□ -0.38
COL12A1Q99715 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
COL12A1Q99715 RN7SL33P-201ENST00000462543 342 ntBASIC12.66□□□□□ -0.38
COL12A1Q99715 ANKRD26P1-203ENST00000569528 966 ntBASIC12.66□□□□□ -0.38
COL12A1Q99715 ACTBP9-201ENST00000587663 1099 ntBASIC12.66□□□□□ -0.38
COL12A1Q99715 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.66□□□□□ -0.38
COL12A1Q99715 AC112220.4-201ENST00000604982 1263 ntBASIC12.66□□□□□ -0.38
COL12A1Q99715 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC12.66□□□□□ -0.38
COL12A1Q99715 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.66□□□□□ -0.38
COL12A1Q99715 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.66□□□□□ -0.38
COL12A1Q99715 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL12A1Q99715 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 AC091304.3-201ENST00000566500 716 ntBASIC12.65□□□□□ -0.38
COL12A1Q99715 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC12.65□□□□□ -0.38
COL12A1Q99715 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms