Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 OR10B1P-201ENST00000601666 907 ntBASIC12.52□□□□□ -0.41
CCL13Q99616 AC006453.4-201ENST00000636949 1252 ntBASIC12.52□□□□□ -0.41
CCL13Q99616 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL13Q99616 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CCL13Q99616 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL13Q99616 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL13Q99616 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 AC020910.5-201ENST00000623668 1865 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 AC006001.1-201ENST00000325130 474 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL13Q99616 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL13Q99616 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL13Q99616 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL13Q99616 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL13Q99616 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL13Q99616 ATP5G2P4-201ENST00000442175 420 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 AC022210.1-201ENST00000449856 793 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 AL391280.1-201ENST00000506969 1062 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL13Q99616 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL13Q99616 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL13Q99616 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL13Q99616 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 AC133552.6-201ENST00000613406 534 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 AHCYP2-201ENST00000430630 1300 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL13Q99616 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 MTHFR-210ENST00000641407 2387 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL13Q99616 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL13Q99616 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL13Q99616 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL13Q99616 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 INE2-201ENST00000630399 1874 ntBASIC12.51□□□□□ -0.41
CCL13Q99616 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCL13Q99616 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL13Q99616 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL13Q99616 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 CD8B2-202ENST00000417670 633 ntBASIC12.5□□□□□ -0.41
CCL13Q99616 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL13Q99616 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL13Q99616 AC026954.1-201ENST00000429771 1293 ntBASIC12.5□□□□□ -0.41
CCL13Q99616 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms