Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CHMP1AP1-201ENST00000445563 662 ntBASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AL355994.2-201ENST00000447882 704 ntBASIC12.37□□□□□ -0.43
GAFA1Q96PS6 TPT1P11-201ENST00000458482 498 ntBASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 YBX1P6-201ENST00000442962 1002 ntBASIC12.36□□□□□ -0.43
GAFA1Q96PS6 PUDPP3-201ENST00000445368 636 ntBASIC12.36□□□□□ -0.43
GAFA1Q96PS6 HIST2H2BB-201ENST00000449108 381 ntBASIC12.36□□□□□ -0.43
GAFA1Q96PS6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 AL358472.3-201ENST00000608147 415 ntBASIC12.36□□□□□ -0.43
GAFA1Q96PS6 AP001002.3-201ENST00000623482 206 ntBASIC12.36□□□□□ -0.43
GAFA1Q96PS6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 FAM45BP-202ENST00000592932 1624 ntBASIC12.36□□□□□ -0.43
GAFA1Q96PS6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms