Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC138035.3-201ENST00000622706 2791 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC023157.3-201ENST00000619086 2088 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AL161772.1-201ENST00000610494 4412 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 PUDPP3-201ENST00000445368 636 ntBASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AL035414.1-201ENST00000451327 857 ntBASIC16.11■□□□□ 0.17
PGBD4Q96DM1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AL109954.1-202ENST00000564051 2148 ntBASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AP000346.4-201ENST00000614827 381 ntBASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AC027601.3-201ENST00000622907 509 ntBASIC16.11■□□□□ 0.17
PGBD4Q96DM1 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 AL008718.2-201ENST00000609206 1313 ntBASIC16.11■□□□□ 0.17
PGBD4Q96DM1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PGBD4Q96DM1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 AC245884.6-201ENST00000515672 1067 ntBASIC16.1■□□□□ 0.17
PGBD4Q96DM1 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 AC091812.3-201ENST00000621362 345 ntBASIC16.1■□□□□ 0.17
PGBD4Q96DM1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.1■□□□□ 0.17
PGBD4Q96DM1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms