Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
DDX1Q92499 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.83■□□□□ 0.12
DDX1Q92499 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
DDX1Q92499 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.83■□□□□ 0.12
DDX1Q92499 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.83■□□□□ 0.12
DDX1Q92499 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
DDX1Q92499 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.83■□□□□ 0.12
DDX1Q92499 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.83■□□□□ 0.12
DDX1Q92499 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
DDX1Q92499 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 RN7SKP175-201ENST00000408472 289 ntBASIC15.82■□□□□ 0.12
DDX1Q92499 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 AC006033.1-201ENST00000440505 426 ntBASIC15.82■□□□□ 0.12
DDX1Q92499 AL355864.2-201ENST00000447420 863 ntBASIC15.82■□□□□ 0.12
DDX1Q92499 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.82■□□□□ 0.12
DDX1Q92499 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
DDX1Q92499 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.82■□□□□ 0.12
DDX1Q92499 AC103988.2-201ENST00000561804 725 ntBASIC15.82■□□□□ 0.12
DDX1Q92499 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.82■□□□□ 0.12
DDX1Q92499 ECM1P1-201ENST00000604092 1279 ntBASIC15.82■□□□□ 0.12
DDX1Q92499 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
DDX1Q92499 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
DDX1Q92499 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
DDX1Q92499 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DDX1Q92499 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DDX1Q92499 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.81■□□□□ 0.12
DDX1Q92499 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
DDX1Q92499 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.81■□□□□ 0.12
DDX1Q92499 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 CALR4P-201ENST00000431943 946 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.81■□□□□ 0.12
DDX1Q92499 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.81■□□□□ 0.12
DDX1Q92499 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.81■□□□□ 0.12
DDX1Q92499 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.81■□□□□ 0.12
DDX1Q92499 AL590640.2-201ENST00000457038 527 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.81■□□□□ 0.12
DDX1Q92499 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DDX1Q92499 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.81■□□□□ 0.12
DDX1Q92499 FTH1P14-201ENST00000482930 551 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 ALG3P1-201ENST00000508806 1114 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
DDX1Q92499 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.81■□□□□ 0.12
DDX1Q92499 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.81■□□□□ 0.12
DDX1Q92499 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.81■□□□□ 0.12
DDX1Q92499 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
DDX1Q92499 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.81■□□□□ 0.12
DDX1Q92499 AC244669.2-201ENST00000612320 853 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
DDX1Q92499 AC015967.2-201ENST00000624092 234 ntBASIC15.81■□□□□ 0.12
DDX1Q92499 AC006435.4-201ENST00000625037 234 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms