Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC113367.3-201ENST00000508316 1912 ntBASIC15.24■□□□□ 0.03
PTCD2Q8WV60 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC007274.1-201ENST00000439805 662 ntBASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC114812.1-204ENST00000449669 728 ntBASIC15.24■□□□□ 0.03
PTCD2Q8WV60 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC068587.3-201ENST00000526613 355 ntBASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ENPP7P5-201ENST00000541031 1031 ntBASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 AC005089.1-201ENST00000619486 2241 ntBASIC15.24■□□□□ 0.03
PTCD2Q8WV60 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC023090.2-201ENST00000625182 2110 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 MIR658-201ENST00000385210 100 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 SEPT14P1-201ENST00000458703 648 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AL122018.1-201ENST00000446607 2310 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms