Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 PRSS30P-206ENST00000641773 873 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AL158070.2-201ENST00000623713 1621 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 KRT8P44-201ENST00000441609 1350 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SAMD11P1-201ENST00000571429 661 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 MIR6787-201ENST00000616675 61 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AC006453.4-201ENST00000636949 1252 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 AC010327.5-201ENST00000586923 3061 ntBASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDND2Q8NHS1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms