Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 TREX1-203ENST00000456089 629 ntTSL 3 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 RN7SL351P-201ENST00000469306 248 ntBASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
COL22A1Q8NFW1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 AL137244.1-201ENST00000422931 865 ntBASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 AC091304.3-201ENST00000566500 716 ntBASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 AC005746.3-201ENST00000614751 393 ntBASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 MIR6125-201ENST00000618986 96 ntBASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL22A1Q8NFW1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 PCDHA14-201ENST00000506751 2298 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 C18orf15-201ENST00000623680 2534 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 AC015688.4-201ENST00000580780 1647 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 RN7SL578P-201ENST00000477781 283 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 ACY3-202ENST00000529256 933 ntTSL 3 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 AP003040.1-201ENST00000532044 1024 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.09■□□□□ 0.65
COL22A1Q8NFW1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 AL050341.2-201ENST00000567508 1541 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 PCDHA1-201ENST00000378133 2726 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 AC133141.1-201ENST00000443015 339 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 AC092910.2-201ENST00000491262 348 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 AC011431.1-201ENST00000512971 230 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 AC004923.3-201ENST00000527532 355 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 AC113385.2-201ENST00000614465 762 ntBASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.08■□□□□ 0.65
COL22A1Q8NFW1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 AC020658.6-201ENST00000623564 1870 ntBASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 AL008638.4-201ENST00000624792 1315 ntBASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL22A1Q8NFW1 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL22A1Q8NFW1 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL22A1Q8NFW1 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL22A1Q8NFW1 ALG1L15P-201ENST00000482834 794 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms